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Mycorrhizae in an experimental urban landscaped site in central Arizona-Phoenix

Publication date: 2006

Author(s):

  • Sean Whitcomb
  • Jean Stutz

Abstract:

The primary objective of this project is to study Mycorrhizal relationships at an experimental xeric urban landscaped site . One study quantified the local diversity and spatial patterns of arbuscular mycorrhizal fungal (AMF) species. AMF species at 25 points in a 9.2 x 9.2 m regular grid pattern were identified using trap cultures. A total of twelve species were detected, with seven species detected in one plot and eleven in the other. Sampling effort curves and jackknife estimates indicate that a limited number of species was still undetected. No single species was dominant at either plot, and a rank-frequency plot for the site revealed a log-normal species distribution. The number of AMF species was not correlated with proximity to plants. Despite the patchiness of plants in the plots, the number of species detected per point exhibited spatial structuring only at the smallest sampling scale in a single plot, and only a single species in each plot was non-randomly distributed.The results indicate that there is a diverse AMF propagule bank at the site and/or there has been significant in-migration from the surrounding metacommunity. The second study examined the effects of three shoot pruning techniques (shearing every 6 weeks, heading back every 6 months and renewal pruning every year) on root length density, biomass, AMF colonization and soil respiration in two woody shrubs, Nerium oleander (oleander) and Leucophyllum frutescens (Texas sage). Roots were sampled at the base of plants by soil coring to depths of 0-20 cm and 20-40 cm in February, after the shearing and heading back treatments had been imposed, but prior to the first renewal pruning, and in May, after all treatments had been imposed. Shearing stimulated root biomass in Nerium in February, but shearing and renewal pruning reduced biomass compared to unpruned plants in both species in May. Nerium colonization was stimulated by shearing and heading back in February and by shearing and renewal pruning in May. Root biomass, length, and soil respiration associated with Leucophyllum were reduced by all pruning treatments in May. The results indicate that heading back may be the most appropriate pruning practice for these shrubs in xeric landscaping.


Keywords:


Temporal Coverage:

2000-01-01 to 2003-12-31

Geographic Coverage:

Geographic Description: Phoenix metropolitan area in Arizona, USA
Bounding Coordinates:
Longitude:-111.940600 to -111.940600
Latitude:33.464700 to 33.464700

Contact:

Information Manager, 
Global Institute of Sustainability,Arizona State University,POB 875402,Tempe
 caplter.data@asu.edu

Methods used in producing this dataset: Show


Data Files (7) :

Tabular: 125_dbg_amf_colonization_1.csv

Description: colonization of arbuscular mycorrhizal fungi

Column Description Type Units
id Unique, automotacilly generated ID number
integer
sampling_date These are the dates when the samples were taken
datetime Format: YYYY-MM-DD
host_species Host species of the sample that was taken
string
pruning_id id of the pruning treatment
string
plot_id This is a unique number assigned to individual plots
smallint
plant_id Abbreviations used to identify the plants under which samples were taken
string
pruning_status status of pruning
string
soil_depth Depth at which the sample was taken
float centimeter
root_length How far away from the base of the plant the sample was taken
float centimeter
no_amf Count of arbuscular mycorrhizal fungi
float dimensionless
hyphae Count of hyphae
float dimensionless
vesicles Count of Vesicles
float dimensionless
arbuscules Count of arbuscles
float dimensionless
coils Count of Coils
float dimensionless
intersections Count of hyphae intersections
float dimensionless
percent_colon Percentage of clolonization by AMF
float dimensionless
mean_colon Mean Colonization of AMF
float dimensionless
percent_ hyphae Percentage of hyphae
float dimensionless
percent_vesicles Percentage of Vesicles
float dimensionless
percent_arbuscules Percentage of arbuscles
float dimensionless
percent_coils Percentage of coils
float dimensionless
colonxlength colonization times length
float dimensionless
notes notes on the data
string
irrigation_notes A brief notes on the irrigation details
string

Tabular: 125_dbg_amf_quadrats_1.csv

Description: Description of the quadrat setup

Column Description Type Units
plot_id A unique numbers assigned to individual plots
smallint
quadrat_id Each plot is split into twenty-five quadrats and numbered accordingly with a unique number for the quadrat
integer
x_coord_m X coordinate for each quadrat in m
float meter
y_coord_m Y coordinate for each quadrat in m
float meter

Tabular: 125_dbg_amf_samples_1.csv

Description: absence/presence of species in quadrats

Column Description Type Units
id unique ID assigned to each row
integer
plot_id A unique number assigned to each of the plots
smallint
sampling_date These are the dates when the samples were taken
datetime Format: YYYY-MM-DD
quadrat Quadrat ID
integer
pruning_status measurement taken before or after pruning
string
species_id A unique number used to identify different species
integer
presence presence absence of species in quadrat
integer
Enumeration:
  • 0: absent
  • 1: present

Tabular: 125_dbg_pruning_1.csv

Description: Pruning regime lookup table

Column Description Type Units
pruning_id id of the pruning treatment
string
pruning_treatment pruning treatment description
string

Tabular: 125_dbg_root_biomass_1.csv

Description: root biomass for Leucophyllum and Nerium in plots

Column Description Type Units
id Unique numbers given to each sample taken
integer
sampling_date The date a sample was taken
datetime Format: YYYY-MM-DD
plant_species Species of the plants under which a biomass sample was taken
string
pruning_status sample taken before or after pruning
string
pruning_id id of the pruning treatment
string
plot_id This is a unique number assigned to individual plots
smallint
plant_id Abbreviations used to identify the plants under which samples were taken
string
soil_depth Depth at which the sample was taken
float centimeter
root_length Length of the stained roots determined by using the gridline intersect method of Giovannetti and Mosse (1980)
float centimeter
root_drywt The weight of all the dry root biomass
float gram
g_per_m3 root dry mass per cubic meter soil volume
float gramPerMeterCubed
g_per_m2 gram root dry mass per square meter soil surface area
float gramsPerSquareMeter
cm_per_cm3 Root length density of the stained roots, calculated as the length of the root per volume of soil
float centimeterPerCentimeterCubed
m_per_g The sample root length in meters divided by the sample dry weight in grams
float meterPerGram
irrigation_notes Notes on irrigation regime
string

Tabular: 125_experimental_plots_1.csv

Description: Pruning regime for the plots lookup table

Column Description Type Units
plot_id This is a unique number assigned to individual plots
smallint
perm_site_id Permenant site id
string
Enumeration:
  • dbg: Desert Botanical Garden
pruning_id id of the pruning treatment used
string
Enumeration:
  • 1yr: pruning once every year
  • 6mo: prining once every 6 months
  • 6wk: prining once every 6 weeks
  • Control: Control
size size of the plot
float squareMeter
location location of the plot
string
description A brief description of the plot
string

Tabular: 125_taxon_list_1.csv

Description: Names of mycorrhiza species

Column Description Type Units
taxon_id A computer gernerated number used to identify different taxa
integer
lter_taxon_id Abbreviated taxon names established and used by the Long Term Ecological Research Program (LTER)
string
scientific_name Genus and species
string
common_name The common name given to the organism
string
taxonomic_family Family
string
genus Genus
string
species Species
string
subspecies subspecies
string
origin Where the species came from
string
author Names of the authors
string
curname Current synomym
string
type growthform
string
native Whether the organisms are native to the Sonoran Desert
string
asu_itis Numbers assigned within the Arizona State University local ITIS database
integer

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